This tool can be used to downsample specific regions. Each region can have it own fraction to downsample.

All other reads will not be touched.


For documentation and manuals visit our page.


DownsampleRegions is part of BIOPET tool suite that is developed at LUMC by the SASC team. Each tool in the BIOPET tool suite is meant to offer a standalone function that can be used to perform a dedicate data analysis task or added as part of a pipeline, for example the SASC team's biowdl pipelines.

All tools in the BIOPET tool suite are Free/Libre and Open Source Software.


For any question related to DownsampleRegions, please use the github issue tracker or contact the SASC team directly at: [email protected].